Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold870
Parameters: 2 7 7 80 10 50 1000
Length:  5862

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23--3559
7
481.4
7
77
17
1750
40
45
10
3
1.55
906--955
26
1.9
26
95
0
91
42
36
20
2
1.63
890--1739
124
6.4
125
72
18
334
39
41
15
3
1.64
442--1689
37
33.7
38
71
19
217
39
41
14
4
1.67
332--2268
44
42.3
47
69
22
306
38
40
15
5
1.70
2253--3591
7
193.3
7
87
10
1876
43
54
0
1
1.12
3594--3693
7
15.5
6
93
4
128
18
65
16
1
1.34
3673--3768
21
4.5
21
75
7
59
34
54
7
4
1.48
3673--3751
7
11.0
7
81
5
59
35
54
7
2
1.42
3700--3751
22
2.4
22
83
0
68
40
53
3
1
1.30
3722--3765
14
3.1
14
90
0
61
34
54
6
4
1.47

Tables:   1

The End!