Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold873
Parameters: 2 7 7 80 10 50 1000
Length:  42462

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
476--539
1
64.0
1
96
0
119
0
0
98
1
0.12
467--539
36
2.0
36
94
0
128
0
0
94
5
0.31
467--539
38
1.9
38
94
0
128
0
0
94
5
0.31
771--814
12
3.3
13
78
15
54
52
0
0
47
1.00
8680--8720
20
2.1
20
90
4
66
53
0
0
46
1.00
10206--10233
7
4.0
7
100
0
56
85
0
0
14
0.59
10230--10338
5
21.8
5
68
17
50
57
0
1
39
1.15
10187--10314
10
12.0
11
70
20
58
64
0
1
33
1.03
10295--10336
21
2.0
21
85
4
57
54
2
0
42
1.13
10186--10294
11
10.2
11
71
15
59
67
0
1
30
1.01
13166--13199
2
17.0
2
100
0
68
50
0
0
50
1.00
13560--13602
21
2.0
22
86
8
63
48
2
11
37
1.52
14273--14334
16
3.7
18
73
14
53
59
0
1
38
1.07
14257--14352
33
3.1
31
77
16
85
59
0
1
39
1.04
14457--14490
3
11.3
3
100
0
68
35
0
0
64
0.94
15483--15565
22
3.7
22
77
16
66
59
0
1
39
1.05
15523--15575
16
3.5
14
72
18
52
54
0
0
45
0.99
15529--15580
16
3.2
16
72
22
54
55
0
0
44
0.99
15483--15553
14
5.8
12
74
21
58
60
0
1
38
1.06
21191--21224
2
17.0
2
100
0
68
50
0
0
50
1.00
22918--22946
2
14.5
2
100
0
58
0
51
0
48
1.00
23931--23972
18
2.3
18
87
0
57
38
40
16
4
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25102--25367
127
2.1
127
94
1
462
37
9
15
37
1.79
26955--26987
17
1.9
17
100
0
66
36
9
6
48
1.60
38408--38445
3
12.7
3
100
0
76
31
0
0
68
0.90
39969--40009
19
2.2
18
86
4
55
41
0
2
56
1.13
39942--40026
26
3.3
25
72
19
66
41
0
2
56
1.12
40058--40100
18
2.7
15
85
10
50
58
0
0
41
0.98
41473--41525
27
2.0
27
88
0
79
26
3
22
47
1.68

Tables:   1

The End!