Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold878
Parameters: 2 7 7 80 10 50 1000
Length:  29831

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
350--468
51
2.3
52
86
4
170
35
18
19
26
1.95
8114--8139
13
2.0
13
100
0
52
30
15
15
38
1.88
13480--13518
13
3.0
13
92
0
60
30
15
15
38
1.88
13641--13687
22
2.3
20
85
10
60
31
19
4
44
1.70
19049--19089
2
20.5
2
84
0
55
46
2
2
48
1.28
19904--19948
18
2.3
20
77
7
58
35
0
0
64
0.94
20837--20878
21
2.0
21
95
0
75
42
14
16
26
1.86
20991--21042
25
2.1
24
96
3
95
26
13
15
44
1.84
23546--23618
16
4.6
16
79
3
67
43
26
19
10
1.83
24561--24602
20
2.0
20
86
13
57
42
0
0
57
0.99
24560--24603
12
4.2
10
78
21
54
40
0
0
59
0.98
24963--25017
16
3.5
15
78
14
58
47
23
16
12
1.81
24988--25026
16
2.4
16
87
8
53
46
25
12
15
1.81
27676--27944
114
2.4
113
80
6
280
36
18
11
32
1.88
27736--27944
114
1.8
113
86
4
305
39
19
10
31
1.84
28689--28774
24
3.7
24
73
14
72
2
20
0
76
0.89

Tables:   1

The End!