Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold883
Parameters: 2 7 7 80 10 50 1000
Length:  34052

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1265--1337
26
2.8
26
91
4
112
21
5
19
53
1.65
2865--2917
20
2.6
21
79
5
65
39
1
1
56
1.21
5213--5271
19
3.0
19
82
12
66
38
0
0
61
0.96
5967--6025
31
2.0
30
86
6
84
47
0
0
52
1.00
8267--8313
23
2.1
22
84
11
60
38
2
2
57
1.23
8863--8902
20
2.0
19
85
9
53
55
0
0
45
0.99
9077--9101
13
1.9
13
100
0
50
88
0
12
0
0.53
9727--9812
30
2.9
30
79
6
88
51
2
10
36
1.49
9749--9827
29
2.8
28
69
14
72
54
1
8
35
1.40
9878--9927
12
4.4
11
80
7
55
34
0
0
66
0.92
9878--9923
23
1.9
25
91
8
78
32
0
0
67
0.91
11419--11487
22
3.0
23
74
23
56
49
1
1
47
1.19
13680--13735
14
3.9
15
77
9
55
37
8
12
41
1.74
13739--13802
14
4.5
14
70
14
51
39
3
10
46
1.55
15375--15419
21
2.1
21
87
0
63
64
4
17
13
1.44
20964--21482
113
4.6
112
76
4
429
33
14
18
33
1.91
20962--21482
224
2.3
223
79
6
525
33
14
18
33
1.90
24627--24662
2
18.0
2
100
0
72
50
0
50
0
1.00
27678--27708
16
1.9
16
93
0
53
64
0
0
35
0.94
30510--30541
16
2.0
16
93
0
55
71
0
0
28
0.86

Tables:   1

The End!