Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold887
Parameters: 2 7 7 80 10 50 1000
Length:  56202

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3732--4248
213
2.4
214
91
2
806
36
7
7
47
1.60
6316--6340
2
12.5
2
100
0
50
52
0
0
48
1.00
17249--18059
327
2.5
328
83
7
1013
28
10
9
51
1.67
17186--18059
166
5.3
163
82
9
952
28
10
9
52
1.66
19480--19923
167
2.7
166
81
6
513
35
12
12
38
1.82
20405--20705
155
1.9
154
82
2
370
20
15
21
42
1.89
30321--30373
26
2.0
26
92
0
88
30
13
9
47
1.74
34365--34401
15
2.4
16
90
9
67
48
5
27
18
1.70
37397--37805
163
2.5
161
88
3
579
28
10
7
54
1.61
37385--37923
163
3.3
163
81
5
419
29
10
7
52
1.63
38313--38344
17
1.9
16
93
6
55
81
0
6
12
0.87
39672--39734
30
2.1
30
96
0
117
68
4
6
20
1.31
39911--39936
3
8.7
3
100
0
52
69
0
0
30
0.89
45269--45301
16
2.1
16
100
0
66
57
12
18
12
1.64
45668--45732
30
2.1
32
85
5
89
43
9
6
41
1.61

Tables:   1

The End!