Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold891
Parameters: 2 7 7 80 10 50 1000
Length:  37259

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1732--1766
18
1.9
18
94
0
61
28
14
28
28
1.95
3628--3675
12
4.5
11
73
26
50
31
2
0
66
1.03
3621--3673
18
2.8
19
77
11
56
33
1
0
64
1.05
3613--3675
30
2.1
30
87
3
90
33
1
0
65
1.03
6109--6249
70
2.0
70
90
0
219
24
14
26
34
1.93
8232--8424
96
2.0
96
95
3
350
27
9
23
38
1.86
8576--8613
6
6.2
6
82
17
51
18
0
2
78
0.86
8576--8613
11
3.1
12
85
14
51
18
0
2
78
0.86
8576--8613
19
2.1
18
90
9
60
18
0
2
78
0.86
14235--14274
15
2.7
15
88
0
62
27
52
7
12
1.66
14749--14975
75
3.0
75
88
0
337
33
8
18
39
1.81
15859--16175
105
3.0
105
95
0
580
30
17
23
28
1.97
21129--21165
13
2.9
13
96
4
67
37
0
0
62
0.96
21130--21170
13
3.4
12
93
6
66
36
0
0
63
0.95
21133--21260
6
21.0
6
73
17
68
49
0
0
50
1.06
21107--21221
42
2.7
43
80
12
107
45
0
0
53
1.06
21206--21260
19
2.8
19
75
20
60
58
0
0
41
0.98
21107--21224
43
2.6
47
83
10
122
44
0
0
54
1.06
23360--23542
34
5.4
34
84
3
217
40
25
7
26
1.81
23360--23542
102
1.8
101
86
3
269
40
25
7
26
1.81
27691--27875
34
5.5
34
77
5
169
42
21
5
30
1.76
28445--28516
23
3.2
23
76
7
67
38
1
1
58
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28474--28539
15
4.1
16
76
20
59
43
0
0
56
0.99
28474--28517
7
6.0
7
82
10
52
43
0
0
56
0.99
28482--28543
18
3.7
18
73
18
62
45
0
0
54
0.99
28510--28551
22
2.1
19
86
13
57
45
2
0
52
1.13
28842--28867
2
13.0
2
100
0
52
50
0
0
50
1.00
29910--29979
24
3.0
24
75
21
76
54
0
0
45
0.99
31221--31247
3
9.0
3
100
0
54
0
33
0
66
0.92
32427--32459
15
2.2
15
94
0
57
36
0
0
63
0.95
33033--33064
14
2.4
14
94
5
57
34
0
0
65
0.93
33887--34015
66
2.0
64
85
8
172
30
16
17
35
1.92
34186--34214
14
2.0
15
93
6
51
31
0
0
68
0.89
35988--36027
18
2.2
18
86
0
53
37
7
2
52
1.43

Tables:   1

The End!