Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold898
Parameters: 2 7 7 80 10 50 1000
Length:  65335

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7071--7096
13
2.0
13
100
0
52
30
15
15
38
1.88
7051--7117
33
2.1
33
85
2
91
35
17
11
34
1.87
9219--9438
58
3.8
58
77
9
182
40
4
18
36
1.70
9249--9440
29
6.7
29
78
8
187
40
4
17
38
1.69
13019--13119
53
1.9
53
85
4
141
21
14
30
32
1.94
16904--16953
16
3.1
16
79
2
55
58
4
2
36
1.29
23998--24035
20
1.9
19
89
5
58
31
0
0
68
0.90
25129--25180
16
3.4
17
72
22
60
44
0
0
55
0.99
25145--25192
14
3.4
14
75
16
53
45
0
0
54
0.99
25112--25194
15
5.6
15
69
21
50
44
0
1
54
1.08
25126--25194
29
2.3
30
92
2
113
44
0
0
55
0.99
25129--25180
14
3.4
16
73
26
58
44
0
0
55
0.99
25199--25236
17
2.3
17
86
4
51
36
0
0
63
0.95
25377--25421
11
4.3
11
80
8
58
33
0
0
66
0.92
25586--25650
3
21.3
3
73
14
53
64
1
1
32
1.12
25578--25653
22
3.3
22
79
13
82
67
1
1
30
1.07
25586--25652
15
4.4
14
81
9
62
65
1
1
31
1.10
25578--25654
25
3.2
24
82
12
97
67
1
1
29
1.07
29162--29320
43
3.7
41
78
9
151
32
12
18
35
1.89
33567--34068
250
2.0
251
95
0
907
35
19
11
33
1.87
35570--35628
26
2.3
27
82
8
70
49
1
0
49
1.11
41046--41140
35
2.7
35
80
0
109
29
29
9
31
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42239--42293
21
2.7
21
86
11
78
32
20
12
34
1.90
42239--42292
20
2.7
20
88
8
74
31
20
12
35
1.90
42322--42377
19
2.9
19
91
2
85
33
17
17
30
1.94
46828--46853
13
2.0
13
100
0
52
38
15
15
30
1.88
46810--46874
32
2.0
32
87
6
94
40
18
13
27
1.89
49055--49120
19
3.8
19
75
22
81
34
10
18
36
1.85
49056--49118
32
2.0
32
96
0
117
34
11
19
34
1.87
49075--49099
13
1.9
13
100
0
50
36
16
16
32
1.90
49162--49186
13
1.9
13
100
0
50
32
16
16
36
1.90
49195--49319
52
2.5
51
87
5
184
35
19
16
28
1.94
55950--56009
20
3.0
20
78
7
77
35
16
15
33
1.90
55950--56005
19
2.8
20
86
2
78
35
16
16
32
1.90
55990--56016
13
2.1
13
100
0
54
40
14
14
29
1.86
61221--61431
53
4.0
53
81
1
235
27
16
30
25
1.96
61211--61401
105
1.8
105
84
0
265
28
15
28
27
1.96

Tables:   1

The End!