Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold901
Parameters: 2 7 7 80 10 50 1000
Length:  36362

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2938--2978
14
3.1
14
79
10
50
58
0
0
41
0.98
5145--5181
2
18.5
2
88
0
56
43
0
5
51
1.24
5147--5181
12
2.9
12
100
0
70
42
0
5
51
1.25
7700--7743
2
22.0
2
100
0
88
50
0
0
50
1.00
7850--7884
3
11.7
3
100
0
70
68
0
0
31
0.90
12947--12986
19
2.0
20
85
4
55
60
2
0
37
1.11
16030--16067
12
3.1
13
81
11
53
47
0
0
52
1.00
21545--21598
25
2.1
26
83
10
67
53
0
1
44
1.11
22451--22487
2
18.5
2
100
0
74
48
0
0
51
1.00
25946--26002
28
2.0
28
100
0
114
36
24
7
31
1.82
29208--29293
5
16.2
5
70
17
50
59
1
1
38
1.13
29208--29293
17
5.4
17
69
20
60
59
1
1
38
1.13
29202--29265
11
6.0
10
76
20
51
59
0
0
40
0.97
30687--30735
25
1.9
26
88
12
75
14
12
2
71
1.23
30900--30952
22
2.5
22
84
9
74
41
0
0
58
0.98
30903--30964
24
2.7
22
82
9
72
38
0
0
61
0.96
31184--31253
33
2.2
33
82
7
81
51
0
0
48
1.00
31447--31529
29
2.8
30
94
5
150
51
7
7
33
1.57
32247--32312
23
2.8
24
77
6
73
65
0
0
34
0.93
32712--32757
22
2.1
22
84
8
58
36
2
0
60
1.09
33451--33544
32
2.8
33
76
16
104
51
1
0
47
1.07
33868--33929
30
2.1
30
84
0
79
54
0
0
45
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34543--34585
22
2.0
22
90
0
68
51
2
41
4
1.35
34935--34980
16
2.8
17
80
9
51
15
8
2
73
1.16
36023--36069
19
2.5
19
86
6
60
19
14
2
63
1.40

Tables:   1

The End!