Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold905
Parameters: 2 7 7 80 10 50 1000
Length:  72065

Tables:   1   

This is table  1  of  1  ( 56 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7832--7867
2
18.0
2
94
0
63
47
2
0
50
1.15
9794--9841
17
3.0
16
81
6
53
52
0
0
47
1.00
9881--9915
7
5.0
7
100
0
70
42
0
0
57
0.99
11390--11425
16
2.2
16
90
9
56
66
5
0
27
1.13
11380--11419
20
2.0
21
90
5
64
65
5
0
30
1.14
16900--16929
12
2.4
13
88
11
53
70
6
0
23
1.11
17518--17549
2
16.0
2
100
0
64
50
0
0
50
1.00
18355--18406
17
3.2
16
71
13
52
42
1
1
53
1.23
18375--18417
23
2.0
23
90
9
72
46
2
0
51
1.13
19219--19248
5
5.8
5
96
4
51
20
0
0
80
0.72
19348--19376
13
2.1
14
93
6
51
44
10
0
44
1.38
19979--20079
45
2.2
48
82
8
120
56
0
0
42
1.06
19979--20054
23
3.4
21
80
14
73
59
0
1
39
1.06
20781--20819
21
2.0
21
85
10
55
38
2
0
58
1.12
21861--21931
29
2.7
26
85
10
74
46
0
0
53
1.00
21870--21931
29
2.2
28
85
8
81
46
0
0
53
1.00
21872--21944
27
2.7
27
80
14
78
45
0
1
53
1.09
22594--22692
31
3.0
33
72
11
87
40
1
3
55
1.22
22674--22706
12
2.8
12
90
4
50
39
3
0
57
1.14
23006--23043
2
19.0
2
100
0
76
50
0
0
50
1.00
24087--24150
2
32.0
2
100
0
128
50
0
0
50
1.00
24226--24256
4
8.0
4
92
7
55
22
0
0
77
0.77
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28740--28768
13
2.2
13
100
0
58
58
0
13
27
1.36
34307--34339
2
16.5
2
100
0
66
51
0
0
48
1.00
36230--36274
2
23.0
2
95
4
83
48
0
0
51
1.00
38016--38056
17
2.4
17
87
0
55
41
7
0
51
1.30
38254--38311
27
2.2
26
82
14
75
46
1
0
51
1.11
38225--38298
31
2.3
32
86
11
98
44
1
0
54
1.08
38252--38300
10
4.5
11
75
19
50
44
2
0
53
1.12
38266--38323
27
2.1
27
84
6
73
50
1
0
48
1.11
38639--38667
13
2.1
14
93
6
51
0
10
0
89
0.48
41087--41154
20
3.2
20
80
19
75
50
2
0
47
1.16
41080--41126
20
2.5
19
80
19
55
48
0
0
51
1.00
41069--41154
43
2.0
45
83
4
113
46
2
0
51
1.13
53448--53482
2
17.5
2
100
0
70
48
0
0
51
1.00
58950--58986
12
3.2
12
77
14
51
48
0
0
51
1.00
59602--59626
4
6.2
4
100
0
50
0
24
0
76
0.80
60332--60421
45
2.0
45
100
0
180
28
20
22
28
1.98
60739--60793
2
27.5
2
92
0
92
49
0
1
49
1.11
61687--61722
6
6.3
6
90
9
58
0
13
0
86
0.58
62396--62443
14
3.1
14
73
21
51
52
0
0
47
1.00
62401--62466
18
3.7
18
74
11
64
53
0
0
46
1.00
62383--62486
48
2.2
46
81
8
122
53
0
0
46
1.00
65508--65532
2
12.5
2
100
0
50
0
0
48
52
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67209--67265
25
2.2
26
81
9
73
38
0
0
61
0.96
67662--67707
13
3.3
15
73
14
53
45
0
0
54
0.99
67772--68052
103
2.6
106
81
10
315
51
1
1
44
1.20
67883--67941
23
2.7
22
80
10
68
59
1
0
38
1.08
67772--68052
108
2.7
101
83
10
314
51
1
1
44
1.20
68024--68078
23
2.4
23
84
6
67
63
5
3
27
1.33
68372--68619
121
2.1
119
87
6
358
42
2
1
53
1.23
68552--68614
21
2.9
21
74
9
56
39
1
1
57
1.18
69568--69712
51
2.8
51
78
5
132
33
13
24
27
1.93
69645--69948
79
3.8
79
84
0
383
31
13
26
27
1.94
69886--70067
51
3.5
52
79
8
219
34
9
23
32
1.88
70676--70704
10
2.7
11
94
5
51
65
6
10
17
1.44

Tables:   1

The End!