Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold906
Parameters: 2 7 7 80 10 50 1000
Length:  17750

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1686--1711
13
2.0
13
100
0
52
30
15
15
38
1.88
1832--1878
21
2.3
20
82
10
60
31
19
4
44
1.70
4240--4265
13
2.0
13
100
0
52
38
15
15
30
1.88
7825--7925
19
5.6
19
80
14
124
34
19
12
32
1.90
7820--7925
51
2.1
52
92
1
178
34
19
12
33
1.89
7863--7887
13
1.9
13
100
0
50
32
16
16
36
1.90
7844--7906
32
2.0
32
93
0
108
33
20
14
31
1.92
11823--11857
13
2.6
13
86
4
52
88
5
5
0
0.63
12182--12228
17
2.8
17
90
6
69
80
0
17
2
0.80
12204--12234
13
2.4
13
94
0
53
83
0
16
0
0.64
12181--12233
9
6.2
8
83
16
63
81
0
16
1
0.79
13123--13152
12
2.6
12
94
5
53
90
10
0
0
0.47
14495--14543
20
2.5
20
86
6
64
30
16
14
38
1.88
14574--14626
19
2.7
20
76
2
63
33
16
18
30
1.94
15322--15355
17
2.0
17
94
0
59
8
35
5
50
1.58
17532--17584
20
2.7
20
91
5
81
32
18
13
35
1.90
17621--17667
19
2.4
20
89
3
69
36
14
21
27
1.93

Tables:   1

The End!