Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold908
Parameters: 2 7 7 80 10 50 1000
Length:  16211

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5489--5550
1
62.0
1
77
0
61
88
8
3
0
0.61
5492--5544
14
3.8
13
83
16
70
88
9
1
0
0.58
5491--5544
15
3.7
14
87
7
81
88
9
1
0
0.58
5489--5550
23
2.7
22
87
7
88
88
8
3
0
0.61
6512--7047
175
3.1
174
81
11
617
25
29
20
23
1.99
6510--7047
55
9.4
56
83
9
565
25
29
20
23
1.99
6510--7047
230
2.3
231
90
1
837
25
29
20
23
1.99
7785--7861
21
3.7
21
86
6
104
36
12
16
33
1.88
7897--7964
19
3.9
19
78
21
85
35
11
14
38
1.83
7918--7942
13
1.9
13
100
0
50
36
16
16
32
1.90
7899--7961
32
2.0
32
96
0
117
34
12
15
36
1.86
10074--10209
52
2.6
51
77
11
148
32
24
11
32
1.90
10193--10265
27
2.6
28
89
6
105
24
31
20
23
1.98
10251--10422
53
3.3
52
78
11
174
29
24
13
33
1.93
10080--10480
214
1.9
217
85
8
568
28
25
13
32
1.94

Tables:   1

The End!