Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold918
Parameters: 2 7 7 80 10 50 1000
Length:  28275

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
263--1065
418
2.0
410
85
5
1088
21
36
29
13
1.91
263--5054
403
11.5
403
67
18
2342
22
34
30
13
1.92
4698--5414
358
2.0
358
100
0
1434
21
35
30
13
1.91
5056--6336
402
3.2
403
92
2
2054
21
37
29
12
1.90
7346--7534
103
1.9
101
89
2
297
4
42
41
10
1.60
7695--7816
64
1.9
64
91
0
199
13
22
45
18
1.83
8155--8341
102
1.8
102
91
4
315
8
40
40
10
1.69
8252--8427
64
2.8
62
77
16
168
7
38
44
8
1.64
6684--8591
819
2.3
811
83
7
2339
13
34
39
12
1.83
16173--16975
418
2.0
409
84
6
1070
21
36
29
13
1.91
16186--19299
404
7.5
404
65
20
1308
22
34
30
13
1.92
18943--19659
358
2.0
358
100
0
1434
21
35
30
13
1.91
19301--20581
402
3.2
403
92
2
2054
21
37
29
12
1.90
25718--25768
9
5.6
9
83
4
66
88
9
1
0
0.60
25715--25768
11
4.8
11
80
15
58
87
11
1
0
0.63
25716--25768
16
3.1
17
78
8
63
88
9
1
0
0.58
25716--25768
1
53.0
1
76
0
52
88
9
1
0
0.58
26750--27537
55
14.3
55
91
4
1229
28
30
20
20
1.97
27055--27197
29
5.1
29
60
21
81
27
33
19
19
1.96
28168--28224
21
2.7
21
94
0
96
36
19
12
31
1.89

Tables:   1

The End!