Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold920
Parameters: 2 7 7 80 10 50 1000
Length:  39492

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10966--11100
1
135.0
1
72
0
90
85
11
2
0
0.74
10969--11093
9
13.6
9
85
10
155
84
12
2
0
0.75
10969--11093
19
6.8
18
83
10
155
84
12
2
0
0.75
12543--12698
29
5.4
29
81
6
172
30
28
17
23
1.97
12543--12698
30
5.4
28
79
9
161
30
28
17
23
1.97
12539--12680
57
2.4
59
84
5
182
30
27
18
23
1.98
12689--13180
34
14.8
34
78
12
495
20
33
11
35
1.88
12717--13175
61
7.0
61
76
18
308
20
33
11
34
1.88
12778--13212
35
12.8
36
78
13
426
20
33
11
34
1.88
12694--13187
104
4.9
102
84
9
573
19
33
10
35
1.87
13185--13319
33
4.1
34
90
6
215
27
33
17
21
1.96
13330--13638
49
6.5
47
86
8
373
24
25
19
30
1.98
13457--13594
43
3.1
43
91
5
195
24
26
19
29
1.98
13548--13666
52
2.2
55
86
4
163
25
23
14
36
1.92
13548--13701
55
2.9
54
81
6
163
24
22
16
37
1.94
14586--14610
13
1.9
13
100
0
50
36
16
16
32
1.90
14566--14632
33
2.0
33
88
0
98
32
11
14
40
1.83
14673--14697
13
1.9
13
100
0
50
32
16
16
36
1.90
18615--18685
20
3.7
20
82
17
105
38
15
15
30
1.89
18636--18691
17
3.1
17
77
22
69
37
16
17
28
1.91
18616--18691
37
2.1
37
100
0
152
36
15
17
30
1.91
18714--18769
19
2.9
19
91
2
85
35
16
17
30
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19521--19568
15
3.2
16
77
14
57
37
6
8
47
1.59
19762--19796
19
1.9
19
88
11
56
42
0
2
54
1.15
19863--19914
22
2.3
24
87
12
83
36
0
0
63
0.95
19866--19906
11
3.6
12
77
12
50
29
0
0
70
0.87
19866--19908
17
2.5
18
77
7
54
30
0
0
69
0.88
19867--19946
22
3.8
22
79
10
80
36
0
1
62
1.03
24160--24216
28
2.0
28
93
0
96
33
10
3
52
1.53
24608--24663
30
1.9
29
82
13
71
46
3
10
39
1.56
25572--25620
19
2.6
19
77
6
55
57
0
2
40
1.10
25586--25642
29
2.0
29
87
12
84
54
1
3
40
1.28
25897--25926
2
15.0
2
100
0
60
50
0
0
50
1.00
26541--26602
24
2.6
23
70
7
61
43
0
0
56
0.99
26600--26642
21
2.0
21
86
0
59
41
0
6
51
1.29
27652--27727
21
3.6
21
76
3
64
30
11
18
39
1.87
39380--39427
25
2.0
22
84
11
60
37
10
6
45
1.64

Tables:   1

The End!