Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold927
Parameters: 2 7 7 80 10 50 1000
Length:  65166

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2582--2629
22
2.2
21
88
3
69
75
2
2
20
1.02
2855--2891
14
2.8
14
88
8
51
21
2
0
75
0.92
4810--4858
24
2.0
24
88
7
73
59
4
4
32
1.35
5058--5110
20
2.7
18
78
21
54
15
5
1
77
1.04
5675--5714
19
2.0
21
85
9
57
35
0
0
65
0.93
11028--11062
2
17.5
2
93
0
61
48
0
2
48
1.16
11056--11131
28
2.7
28
79
4
82
52
14
5
27
1.63
13900--14131
117
2.0
117
98
0
446
37
17
9
35
1.82
15261--15379
16
7.0
16
68
15
78
31
12
16
39
1.86
15211--15381
67
2.6
67
97
0
315
29
14
15
40
1.87
15261--15430
87
2.0
83
84
6
216
29
14
14
41
1.86
15345--15401
20
2.8
20
86
5
71
31
14
14
40
1.85
21695--21751
28
2.1
26
90
9
87
50
0
0
49
1.00
21703--21761
28
2.1
29
87
3
84
55
0
0
44
0.99
22376--22514
51
2.7
52
86
1
181
33
15
9
41
1.79
24828--25140
80
3.9
80
83
2
367
30
28
10
30
1.90
25097--25381
109
2.6
108
83
7
348
30
27
10
30
1.91
32000--32034
2
17.5
2
100
0
70
51
0
0
48
1.00
32755--32820
24
2.7
24
81
11
73
43
3
1
51
1.26
32736--32796
33
1.9
31
83
12
79
40
1
4
52
1.33
32771--32820
24
2.0
24
92
3
82
42
2
2
54
1.23
33084--33116
12
2.8
12
95
0
57
3
12
0
84
0.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33777--33817
20
2.0
21
90
9
66
43
0
2
53
1.13
34919--34970
24
2.2
23
83
13
61
71
0
5
23
1.07
35138--35174
17
2.3
16
90
9
58
0
18
0
81
0.70
35141--35175
18
1.9
18
100
0
70
0
20
0
80
0.72
40115--40189
20
3.8
19
80
7
87
41
10
13
34
1.79
40703--41774
257
4.2
256
90
2
1605
21
16
33
28
1.95
40715--41773
28
36.9
29
89
3
1483
21
17
32
28
1.96
43002--43054
1
53.0
1
80
0
61
0
1
7
90
0.52
43002--43055
11
4.6
11
84
13
72
0
1
9
88
0.58
42992--43039
21
2.3
21
85
7
62
2
4
8
85
0.80
43004--43052
25
2.0
25
95
0
89
0
2
8
89
0.55
56462--56557
45
2.2
45
94
1
167
7
25
8
59
1.52
56543--56610
20
3.2
21
80
14
77
13
10
1
75
1.12
58109--58153
9
4.5
11
78
18
53
64
0
0
35
0.94
61124--61167
20
2.1
21
87
4
63
31
6
2
59
1.36
62376--62405
2
15.0
2
100
0
60
50
0
0
50
1.00
62408--62467
28
2.1
28
90
0
93
55
18
3
23
1.58

Tables:   1

The End!