Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold932
Parameters: 2 7 7 80 10 50 1000
Length:  54414

Tables:   1   

This is table  1  of  1  ( 44 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--143
67
2.1
67
83
3
171
28
12
27
30
1.93
36--185
68
2.2
68
81
1
167
32
12
26
30
1.92
7006--7056
22
2.4
21
90
6
84
54
3
23
17
1.59
7012--7055
22
2.0
22
100
0
88
54
4
22
18
1.61
7378--7433
12
4.4
12
78
12
58
51
0
0
48
1.00
7378--7422
14
3.3
14
81
6
65
48
0
0
51
1.00
7370--7422
27
2.0
26
96
3
97
50
0
0
49
1.00
10269--10320
27
2.0
27
88
3
79
48
0
0
51
1.00
13321--13378
16
3.6
16
78
0
62
41
6
1
50
1.39
22447--22488
2
21.0
2
100
0
84
50
0
0
50
1.00
22552--22586
1
35.0
1
100
0
70
0
100
0
0
0.00
22788--22840
2
26.5
2
88
0
79
1
47
1
49
1.23
25518--25555
16
2.3
17
90
4
60
65
7
0
26
1.19
25576--25601
3
8.7
3
100
0
52
34
0
0
65
0.93
25999--26037
20
2.0
20
89
0
60
46
0
2
51
1.14
30461--30501
13
3.2
13
82
0
55
39
12
12
36
1.80
31199--31225
13
2.1
13
100
0
54
48
0
7
44
1.31
31830--31861
14
2.4
14
94
5
57
43
0
0
56
0.99
31828--31912
35
2.4
35
80
11
93
52
1
0
45
1.08
34612--34636
2
12.5
2
100
0
50
52
0
0
48
1.00
35335--35453
19
5.8
20
74
13
91
66
3
0
29
1.13
35358--35414
29
2.1
26
87
9
78
64
3
0
31
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35984--36008
2
12.5
2
100
0
50
52
0
0
48
1.00
36008--36033
2
13.0
2
100
0
52
50
0
50
0
1.00
36617--36658
2
21.0
2
90
0
66
50
0
2
47
1.14
37063--37101
2
19.5
2
100
0
78
48
0
0
51
1.00
37771--37821
17
2.9
17
80
14
50
66
0
1
31
1.03
37784--37816
15
2.1
16
88
11
50
69
0
3
27
1.03
38521--38556
2
18.0
2
100
0
72
50
0
0
50
1.00
39567--39604
19
2.0
19
89
0
58
36
2
0
60
1.11
42859--42901
2
21.5
2
100
0
86
48
0
0
51
1.00
44352--44426
39
1.9
39
91
0
123
32
16
21
30
1.95
50579--50608
2
15.0
2
100
0
60
50
0
0
50
1.00
52751--52793
18
2.4
18
80
0
50
25
0
4
69
1.07
52914--52957
19
2.3
19
96
0
79
20
0
0
79
0.73
53488--53527
16
2.4
17
84
16
57
75
5
5
15
1.15
54145--54297
17
8.6
17
68
19
71
66
1
1
30
1.14
54154--54316
9
19.8
8
69
23
90
63
2
1
31
1.18
54146--54292
24
5.8
25
71
18
108
65
2
2
30
1.15
54153--54225
33
2.2
33
85
9
96
64
1
1
32
1.11
54136--54292
9
17.3
9
70
21
98
64
1
1
31
1.15
54313--54374
16
3.8
15
74
16
52
27
6
0
66
1.16
54313--54359
8
5.8
8
80
14
51
27
4
0
68
1.08
54332--54413
41
2.1
39
84
11
105
29
4
1
64
1.22

Tables:   1

The End!