Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold944
Parameters: 2 7 7 80 10 50 1000
Length:  40262

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
334--366
15
2.1
17
88
11
52
60
0
0
39
0.97
1238--1280
20
2.1
21
86
4
61
0
16
4
79
0.90
1761--1817
26
2.2
26
81
9
64
64
5
3
26
1.30
1871--1910
21
2.0
19
90
9
62
70
0
0
30
0.88
1836--1899
16
3.8
16
71
20
51
64
0
0
35
0.94
1873--1914
14
3.1
14
82
6
50
66
0
0
33
0.92
10562--10681
52
2.3
52
95
0
213
29
16
18
35
1.93
10553--10701
52
2.9
51
86
4
201
31
15
17
35
1.91
10690--10714
13
1.9
13
100
0
50
36
16
16
32
1.90
10754--10823
33
2.1
33
89
0
104
40
14
11
34
1.82
10779--10803
13
1.9
13
100
0
50
32
16
16
36
1.90
20553--20669
40
2.9
40
97
0
216
47
11
29
11
1.75
29776--29815
14
2.9
14
84
0
53
50
2
0
47
1.14
34271--34334
31
2.1
30
85
8
85
25
6
10
57
1.56
34360--34410
21
2.4
21
81
15
61
74
0
1
23
0.92
38231--38719
79
6.2
79
79
5
459
35
12
23
29
1.91
38229--38722
237
2.1
237
83
6
617
35
12
23
28
1.91

Tables:   1

The End!