Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold952
Parameters: 2 7 7 80 10 50 1000
Length:  47358

Tables:   1   

This is table  1  of  1  ( 47 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
504--528
13
1.9
13
100
0
50
52
0
0
48
1.00
1456--1493
18
2.1
19
90
5
60
63
2
0
34
1.09
3150--3223
22
3.6
22
63
17
59
43
0
1
55
1.08
3280--3311
15
2.1
16
94
5
57
75
0
0
25
0.81
3360--3394
12
3.0
12
91
4
54
62
0
0
37
0.95
3307--3395
46
1.9
46
81
4
108
53
1
2
42
1.20
6187--6253
21
3.4
19
76
19
66
70
1
0
28
0.96
6196--6243
16
2.9
16
87
6
69
70
0
0
29
0.87
6197--6289
18
5.0
18
72
20
68
66
2
0
31
1.03
6190--6302
28
3.9
29
75
15
92
64
1
0
33
1.04
6454--6488
1
35.0
1
94
0
61
97
0
2
0
0.19
6453--6491
9
4.3
9
93
0
60
92
0
7
0
0.39
6856--6889
3
11.3
3
100
0
68
0
35
0
64
0.94
9394--9418
13
1.9
13
100
0
50
32
4
8
56
1.47
10423--10481
3
19.7
3
89
6
93
64
0
0
35
0.94
10443--10519
21
3.5
21
76
18
61
62
0
0
37
0.96
10503--10613
21
5.0
22
72
13
86
57
1
0
40
1.09
10527--10613
23
3.9
23
74
19
85
57
1
0
41
1.06
10422--10609
12
16.8
12
68
18
70
60
1
0
38
1.04
17098--17149
20
2.6
21
75
9
54
46
0
0
53
1.00
17095--17245
65
2.3
65
78
19
156
41
0
0
56
1.08
17294--17343
24
2.1
24
81
7
57
54
0
2
44
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17338--17391
15
3.3
16
79
10
65
40
0
0
59
0.98
17803--17835
14
2.4
14
90
10
50
30
0
0
69
0.88
17865--17920
29
2.0
28
82
3
67
64
0
0
35
0.94
21181--21243
28
2.2
29
77
8
76
31
0
1
66
1.01
21200--21244
20
2.2
21
84
11
58
28
0
0
71
0.87
22196--22227
17
1.9
17
93
6
57
62
0
0
37
0.95
22878--22929
14
3.4
14
74
23
50
28
3
1
65
1.21
22883--22939
21
2.6
21
72
25
55
29
3
1
64
1.20
26748--26780
2
16.5
2
93
0
57
51
0
3
45
1.16
28468--28506
16
2.4
16
100
0
78
30
17
12
38
1.88
32358--32390
2
16.5
2
100
0
66
51
0
0
48
1.00
32390--32415
2
13.0
2
100
0
52
50
0
50
0
1.00
33081--33138
6
9.7
6
74
20
50
58
0
1
39
1.08
33081--33175
17
4.9
18
75
20
77
54
3
3
38
1.32
33085--33175
41
2.3
42
82
16
106
54
3
3
38
1.33
35787--35885
30
3.3
30
73
5
94
54
1
4
40
1.26
35788--35881
29
3.2
29
71
11
84
53
1
4
41
1.27
36563--36605
2
21.5
2
100
0
86
48
0
0
51
1.00
36890--36921
3
10.7
3
100
0
64
31
0
0
68
0.90
39858--39894
13
2.8
14
84
12
51
45
2
0
51
1.15
39832--39898
29
2.4
28
82
5
82
44
2
0
52
1.16
40063--40092
15
2.1
15
93
6
53
63
0
0
36
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40068--40103
18
1.9
19
88
5
56
63
0
2
33
1.08
40297--40338
14
2.8
15
85
10
59
30
0
2
66
1.04
44070--44116
24
2.0
24
91
0
76
38
17
8
36
1.80

Tables:   1

The End!