Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold956
Parameters: 2 7 7 80 10 50 1000
Length:  57354

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9180--9223
2
22.0
2
90
0
70
50
0
45
4
1.22
10469--10526
26
2.3
25
90
3
89
46
6
25
20
1.75
13931--14184
128
2.0
128
88
3
377
46
14
13
25
1.81
16289--16331
14
3.0
14
86
10
52
32
0
0
67
0.91
17760--17845
25
3.3
24
78
16
91
55
0
0
44
0.99
17779--17840
13
4.3
15
74
14
58
56
0
0
43
0.99
17758--17848
29
3.2
30
78
18
90
57
0
0
42
0.99
20695--20749
26
2.3
23
81
9
65
45
1
7
45
1.41
20742--20778
2
19.0
2
84
15
51
51
0
2
45
1.15
21987--22036
25
2.0
25
100
0
100
36
28
16
20
1.93
22942--22975
16
2.1
16
100
0
68
17
26
23
32
1.97
29664--29694
6
5.3
6
92
7
55
51
0
0
48
1.00
30038--30167
64
2.0
64
92
0
215
40
10
10
38
1.74
32219--32299
35
2.1
40
82
13
100
59
3
6
30
1.39
36143--36211
33
2.2
32
82
12
90
56
0
2
40
1.14
36311--36370
16
3.8
16
81
14
61
65
6
0
28
1.18
36316--36380
33
1.9
34
84
3
87
64
6
0
29
1.17
39940--39969
15
2.1
15
93
6
53
56
3
0
40
1.16
40002--40066
21
3.0
21
82
13
62
50
0
0
49
1.00
40027--40090
23
2.7
23
83
13
78
62
0
0
37
0.95
40027--40096
22
3.1
23
80
15
76
61
0
0
38
0.96
45146--45183
20
1.9
20
89
10
60
63
0
0
36
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55763--55819
19
2.9
21
80
14
68
59
0
0
40
0.97
56131--56160
10
3.0
10
90
0
51
56
0
0
43
0.99
56182--56310
62
2.1
63
89
2
199
39
3
10
47
1.53
56305--56371
30
2.2
31
97
2
127
44
2
2
49
1.32
56297--56393
31
3.0
30
75
16
88
45
3
6
45
1.44
56296--56633
150
2.3
150
74
15
358
42
1
7
47
1.43
56628--56686
31
1.9
31
85
0
82
45
5
13
35
1.66
56587--56732
74
2.0
73
93
1
247
45
3
12
39
1.59
56845--56905
2
31.0
2
85
9
81
50
0
4
44
1.23

Tables:   1

The End!