Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold957
Parameters: 2 7 7 80 10 50 1000
Length:  27183

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4108--4197
47
1.9
47
97
0
171
38
1
18
41
1.58
5263--5316
15
3.3
17
72
17
51
61
9
0
29
1.27
5258--5364
31
3.4
31
79
10
110
59
7
0
32
1.25
5842--5879
17
2.4
17
82
8
53
55
0
2
42
1.14
6983--7017
18
1.9
18
88
11
54
34
0
0
65
0.93
7713--7761
25
2.0
25
87
0
71
53
0
0
46
1.00
7778--7813
14
2.5
15
90
4
56
72
0
0
27
0.85
7763--7815
15
3.7
13
80
16
52
67
1
0
30
1.01
7828--7934
30
3.6
30
73
15
89
55
0
0
43
1.06
7864--7936
31
2.5
30
80
12
89
57
0
0
42
0.98
7897--7936
21
2.0
20
90
5
62
60
0
0
40
0.97
8345--8394
25
2.1
24
85
7
66
34
0
2
64
1.05
9639--9678
15
2.6
15
92
4
62
27
2
0
70
1.01
9639--9686
15
3.2
14
80
11
51
31
4
0
64
1.12
9804--9880
37
2.1
36
83
7
93
55
2
2
38
1.27
10306--10346
14
2.9
14
85
10
57
46
0
2
51
1.14
10331--10369
18
2.2
18
86
9
53
38
0
0
61
0.96
13264--13300
2
18.5
2
88
0
56
51
48
0
0
1.00
16831--16872
19
2.2
19
83
8
50
47
2
9
40
1.49
18443--18492
18
2.7
19
85
11
61
30
4
4
62
1.32
19569--19635
37
1.9
35
88
11
102
29
23
11
34
1.91
20095--20184
13
6.0
13
73
26
72
28
15
15
40
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20108--20202
19
5.6
19
72
27
106
28
15
15
40
1.89
20075--20202
32
4.0
32
96
1
229
28
14
15
41
1.87
20845--20878
16
2.1
17
89
10
54
35
8
5
50
1.58
22209--22279
36
2.0
36
97
2
135
40
11
28
19
1.86
22519--22565
23
2.1
23
88
11
71
61
0
0
38
0.96
24703--24759
22
2.8
20
81
5
69
26
15
17
40
1.90
24676--24788
54
2.1
51
79
7
118
30
15
15
38
1.88

Tables:   1

The End!