Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold967
Parameters: 2 7 7 80 10 50 1000
Length:  37529

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2668--2692
10
2.5
10
100
0
50
36
24
8
32
1.84
2840--2887
18
2.6
18
74
12
53
37
4
0
58
1.18
4469--4496
6
4.7
6
100
0
56
32
0
67
0
0.91
10580--10641
22
2.9
22
75
13
58
32
0
4
62
1.16
10987--11011
2
12.5
2
100
0
50
48
0
0
52
1.00
10996--11128
61
2.2
61
86
2
178
39
2
9
48
1.49
11166--11283
62
1.9
62
84
3
157
38
7
6
47
1.59
15116--15149
17
1.9
18
88
5
52
11
20
23
44
1.84
19132--19172
20
2.0
21
90
4
66
39
0
2
58
1.11
19123--19173
21
2.4
21
80
6
59
41
0
1
56
1.10
19424--19469
20
2.4
19
85
10
58
34
2
4
58
1.30
19489--19558
22
3.3
20
73
9
59
61
5
0
32
1.20
20057--20087
12
2.7
11
90
9
53
0
9
0
90
0.46
20153--20186
2
17.0
2
93
0
59
52
0
0
47
1.00
22325--22377
19
2.5
22
80
20
69
49
0
0
50
1.00
22544--22594
17
3.1
17
83
13
63
62
0
0
37
0.95
22550--22604
15
3.6
15
80
9
58
63
0
0
36
0.95
23621--23687
33
2.0
33
85
0
89
35
11
11
40
1.79
23729--23753
13
1.9
13
100
0
50
32
16
16
36
1.90
23742--23882
52
2.7
50
85
6
192
33
17
17
31
1.94
23762--23882
52
2.3
52
95
0
215
34
17
18
29
1.94
27118--27160
21
2.0
21
95
0
77
27
20
20
30
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32326--32381
22
2.5
23
97
2
105
62
8
10
17
1.52
33296--33366
20
3.6
19
75
7
70
40
12
11
35
1.79
33289--33366
40
2.0
39
89
2
120
41
12
11
34
1.80
33849--35473
65
26.7
63
74
17
985
15
18
34
31
1.92
33849--34389
32
17.2
32
81
12
570
15
17
35
31
1.92
34688--35473
32
24.6
32
82
11
904
15
18
35
30
1.92
35475--36209
27
26.8
26
90
3
916
27
14
34
23
1.93
35475--36209
82
9.0
81
91
3
1143
27
14
34
23
1.93
35475--36209
110
6.7
108
92
2
1143
27
14
34
23
1.93

Tables:   1

The End!