Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold979
Parameters: 2 7 7 80 10 50 1000
Length:  30099

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
710--761
20
2.6
20
84
0
68
36
21
5
36
1.77
9637--9834
79
2.5
77
81
7
211
28
18
29
23
1.98
9786--9857
28
2.6
28
88
0
99
23
19
34
22
1.96
9707--9942
108
2.2
110
84
3
302
28
16
28
25
1.97
9814--9995
80
2.2
80
87
1
274
28
14
29
27
1.95
9922--10096
52
3.4
50
80
9
181
30
14
26
28
1.95
9846--10238
185
2.1
185
90
3
621
31
12
26
29
1.93
9976--10227
133
1.9
130
82
8
312
32
13
25
28
1.93
10115--10233
51
2.3
53
84
7
145
34
10
22
31
1.89
12608--12633
13
2.0
13
100
0
52
38
15
15
30
1.88
12587--12653
33
2.0
33
88
0
98
43
16
14
25
1.86
12673--12740
19
3.9
18
76
23
83
38
14
11
35
1.83
12695--12719
13
1.9
13
100
0
50
32
16
16
36
1.90
12676--12738
32
2.0
32
96
0
117
36
15
12
34
1.86
13374--14283
55
16.3
55
86
5
1174
22
20
28
28
1.98
13821--13906
26
3.2
26
65
20
68
18
18
33
29
1.95
15266--15325
13
4.8
12
76
15
59
0
8
8
83
0.82
15265--15324
16
3.7
16
77
4
66
0
10
6
83
0.81
15252--15321
34
2.0
37
86
13
103
0
12
5
81
0.86
25728--25778
1
51.0
1
100
0
102
0
0
100
0
0.00

Tables:   1

The End!