Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold984
Parameters: 2 7 7 80 10 50 1000
Length:  32786

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1944--2000
21
2.8
20
78
5
60
33
5
0
61
1.18
4710--4781
28
2.6
28
86
0
90
25
19
33
22
1.97
4770--5108
52
6.4
52
68
17
153
32
12
25
29
1.92
4926--4994
27
2.5
27
88
6
95
23
21
30
24
1.99
4715--5108
212
1.9
212
87
4
589
31
13
26
28
1.94
4985--5103
51
2.3
54
85
7
156
34
11
21
31
1.90
7468--7493
13
2.0
13
100
0
52
38
15
15
30
1.88
7533--7600
19
3.9
18
76
23
83
38
14
11
35
1.83
7555--7579
13
1.9
13
100
0
50
32
16
16
36
1.90
7536--7598
32
2.0
32
96
0
117
36
15
12
34
1.86
11576--11625
22
2.3
22
79
6
57
46
0
0
54
1.00
11817--11849
2
16.5
2
100
0
66
48
0
0
51
1.00
16273--16300
13
2.2
13
100
0
56
60
0
0
39
0.97
16432--16479
24
1.9
26
83
8
64
31
2
0
66
1.03
16694--16735
19
2.3
18
88
12
59
61
0
0
38
0.96
16694--16744
19
2.8
17
78
18
50
58
1
0
39
1.09
16916--16949
16
2.1
16
100
0
68
58
11
0
29
1.33
17549--17582
12
2.7
13
90
4
52
23
2
2
70
1.15
18232--18281
19
2.6
19
78
9
57
54
0
0
46
1.00
18780--18832
17
3.1
17
76
15
56
33
0
0
66
0.92
18772--18835
12
5.5
12
76
23
66
34
0
0
65
0.93
19984--20045
20
3.1
21
77
11
67
37
0
1
61
1.06
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19993--20056
10
6.3
10
73
10
58
42
0
0
57
0.98
22459--22492
3
11.3
3
87
0
50
32
0
38
29
1.58
24649--24692
14
3.1
14
83
0
52
50
0
0
50
1.00
25255--25286
16
1.9
17
93
6
57
50
0
0
50
1.00
25882--25937
16
3.4
16
76
16
53
39
0
0
60
0.97
25882--25935
17
3.4
15
82
15
56
38
0
0
61
0.96
26904--26942
10
3.8
10
93
3
60
30
0
0
69
0.89
26921--26960
17
2.4
16
84
8
53
32
2
0
65
1.06
31896--31968
26
2.8
26
78
14
71
38
0
0
61
0.96
32321--32348
6
4.7
6
100
0
56
85
0
14
0
0.59

Tables:   1

The End!