Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold986
Parameters: 2 7 7 80 10 50 1000
Length:  21484

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2075--2195
52
2.3
53
91
5
201
18
13
17
51
1.77
2263--2334
22
3.3
22
66
14
67
19
11
16
52
1.73
2221--2355
44
3.0
45
91
4
218
22
11
12
52
1.72
6352--6415
32
2.0
32
87
6
94
14
23
17
45
1.84
6500--6540
16
2.6
16
82
17
50
21
29
14
34
1.93
7287--7399
46
2.4
47
79
7
133
38
23
13
24
1.91
8315--9010
155
4.5
155
76
6
477
40
15
15
27
1.88
12429--12613
93
2.0
93
91
0
298
47
14
28
9
1.76
12621--12802
94
1.9
93
87
1
265
50
14
23
12
1.77
12890--12994
36
2.9
36
87
1
140
55
20
18
6
1.64
12900--13013
36
3.2
36
80
8
101
57
17
17
7
1.61
12996--13057
22
2.8
22
85
2
88
56
14
27
1
1.48
13196--13225
16
1.9
15
93
6
51
86
0
13
0
0.57
13196--13233
17
2.3
17
90
4
60
86
0
13
0
0.56
15348--15476
70
1.9
69
91
3
215
31
17
10
41
1.82
18059--18092
18
1.9
17
88
5
50
64
2
20
11
1.39

Tables:   1

The End!