Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold991
Parameters: 2 7 7 80 10 50 1000
Length:  40522

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
214--247
15
2.1
17
89
10
54
52
5
0
41
1.25
1149--1201
25
2.1
25
82
6
63
22
0
1
75
0.90
1766--1796
16
1.9
16
93
0
53
12
9
29
48
1.73
2521--2559
19
2.2
17
86
9
51
30
2
0
66
1.05
5134--5165
13
2.5
13
94
0
55
34
18
12
34
1.89
9636--9663
2
14.0
2
100
0
56
50
0
0
50
1.00
9791--9835
19
2.3
20
85
11
58
37
0
8
53
1.32
9905--10036
64
2.1
64
84
2
167
50
3
3
42
1.35
10527--10565
19
2.1
19
95
0
69
41
2
15
41
1.61
11321--11362
13
3.2
13
80
9
50
61
0
2
35
1.09
11414--11446
17
1.9
17
93
0
57
45
0
0
54
0.99
13419--13480
29
2.2
28
82
2
70
33
3
1
61
1.22
13689--13731
16
2.7
16
81
0
50
46
18
11
23
1.82
14294--14353
29
2.1
29
96
0
111
33
13
18
35
1.89
15226--15277
22
2.4
22
80
0
59
40
1
7
50
1.42
15254--15286
14
2.3
15
89
5
50
48
0
3
48
1.17
17042--17088
16
3.1
16
88
11
73
57
0
0
42
0.98
17042--17120
29
2.8
28
81
11
74
63
0
2
34
1.08
17129--17159
15
2.1
14
94
5
53
61
3
0
35
1.12
17131--17176
14
3.1
16
82
17
55
56
6
0
36
1.25
17295--17319
2
12.5
2
100
0
50
52
0
0
48
1.00
24614--24699
42
2.1
40
89
6
129
47
1
1
50
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24734--24800
16
4.1
15
74
22
55
46
1
0
52
1.09
24775--24831
18
3.0
18
76
18
62
43
0
0
56
0.99
24761--24839
15
5.3
15
71
18
67
41
0
0
58
0.98
24829--24870
22
1.9
22
90
9
68
61
0
0
38
0.96
25035--25141
16
7.6
13
69
25
51
57
0
0
42
0.99
25096--25148
18
3.2
18
70
27
53
49
0
0
50
1.00
25057--25148
30
3.0
30
82
9
107
56
0
0
43
0.99
25830--25892
26
2.7
23
75
15
65
42
3
12
41
1.59
25824--25892
22
3.0
22
71
21
68
40
4
13
42
1.63
26150--26196
2
23.5
2
95
0
85
53
0
0
46
1.00
28796--28825
2
15.0
2
100
0
60
50
0
0
50
1.00
31884--31913
15
2.1
14
93
6
51
83
3
13
0
0.77

Tables:   1

The End!