Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010003.1 Corchorus capsularis cultivar CVL-1 contig10024, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10277

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--33
2
16.5
2
100
0
66
51
0
0
48
1.00
3626--3765
73
2.0
72
86
6
198
49
0
12
37
1.47
3745--3820
39
1.9
39
89
5
118
53
1
11
32
1.45
3670--3891
109
2.0
111
96
2
412
53
1
9
36
1.42
3978--4010
6
5.8
6
86
13
52
51
0
15
33
1.43
3978--4010
17
1.9
17
88
11
50
51
0
15
33
1.43
4683--4718
5
7.2
5
100
0
72
80
0
19
0
0.71
5270--5330
33
1.9
31
93
6
104
57
9
6
26
1.55
5504--5562
26
2.3
26
80
14
68
71
6
8
13
1.30
10067--10101
2
17.5
2
100
0
70
48
0
0
51
1.00

Tables:   1

The End!