Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010004.1 Corchorus capsularis cultivar CVL-1 contig10025, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48508

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27152--27239
31
2.8
31
91
1
131
38
30
11
19
1.87
29698--29724
7
3.9
7
100
0
54
25
14
14
44
1.84
31946--32105
60
2.7
60
87
3
216
38
18
18
25
1.93
32135--32360
60
3.8
60
87
1
310
30
17
15
35
1.92
32227--32316
29
3.0
29
72
12
92
36
17
13
32
1.89
32199--32363
31
5.5
30
69
13
106
32
17
13
36
1.89
44338--44389
17
3.1
17
77
0
68
23
5
7
63
1.43
44892--44921
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!