Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010006.1 Corchorus capsularis cultivar CVL-1 contig10027, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73457

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1388--1418
11
2.8
11
95
0
53
0
22
12
64
1.27
5700--5755
27
2.1
27
100
0
112
23
14
3
58
1.51
7298--7343
23
2.0
23
100
0
92
30
21
34
13
1.91
8253--8279
2
13.5
2
100
0
54
0
0
48
51
1.00
8884--8964
41
2.0
41
92
0
135
44
19
8
27
1.80
12016--12072
28
2.0
28
89
0
87
21
36
1
40
1.63
20902--20940
19
2.2
19
86
9
55
15
15
12
56
1.68
28324--28404
41
2.0
42
90
7
130
39
14
14
30
1.87
28740--28770
13
2.4
13
94
0
53
38
22
19
19
1.93
32684--32750
25
2.7
24
75
13
64
7
44
0
47
1.31
46264--46303
17
2.3
18
95
4
73
50
10
2
37
1.50
58843--58890
26
2.0
24
88
12
71
33
10
8
47
1.68
61453--61477
2
12.5
2
100
0
50
48
0
0
52
1.00

Tables:   1

The End!