Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010011.1 Corchorus capsularis cultivar CVL-1 contig10032, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23552

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5675--5709
18
1.9
18
94
0
61
31
31
2
34
1.73
8650--8677
2
14.0
2
100
0
56
50
0
0
50
1.00
11344--11398
2
30.0
2
76
23
59
49
0
1
49
1.11
11471--11500
15
1.9
16
93
6
53
56
0
0
43
0.99
19673--19714
15
2.9
15
86
6
61
30
2
0
66
1.04
21168--21463
109
2.7
109
92
4
459
37
11
1
50
1.48
23139--23198
21
2.8
21
84
5
75
41
13
8
36
1.74
23523--23552
2
15.0
2
100
0
60
50
0
50
0
1.00

Tables:   1

The End!