Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010014.1 Corchorus capsularis cultivar CVL-1 contig10035, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33160

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7314--7344
15
2.1
15
100
0
62
19
12
6
61
1.53
13126--13170
1
45.0
1
95
0
72
0
4
0
95
0.26
14526--14570
23
2.0
23
86
0
63
26
17
2
53
1.56
16339--16424
35
2.5
35
78
3
93
41
20
16
20
1.90
17483--17809
168
1.9
169
97
0
620
31
22
10
36
1.87
20037--20073
3
12.0
3
88
5
56
0
32
0
67
0.91
21116--21152
2
18.5
2
94
0
65
51
0
2
45
1.15
25386--26473
37
29.4
37
74
8
790
43
15
17
23
1.87
25492--26471
296
3.3
295
87
2
1267
43
15
17
23
1.88
26380--26501
37
3.3
35
73
8
93
40
16
18
25
1.90
25492--26473
74
13.3
74
80
6
1008
43
15
17
23
1.88
28101--28150
14
3.6
14
79
12
59
30
6
16
48
1.70

Tables:   1

The End!