Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010015.1 Corchorus capsularis cultivar CVL-1 contig10036, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17720

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
520--552
13
2.5
13
95
0
57
15
24
36
24
1.93
1777--1928
25
5.7
25
79
13
178
21
27
25
25
1.99
1822--1928
51
2.1
50
89
1
160
22
28
23
26
1.99
4713--4773
21
2.9
21
75
4
52
44
6
31
18
1.75
5026--5253
49
4.7
49
96
0
413
27
13
16
42
1.85
5362--5404
22
2.0
22
85
0
59
30
30
25
13
1.94
5359--5622
73
3.6
73
90
1
388
27
28
20
24
1.99
14160--14195
1
36.0
1
100
0
72
0
0
0
100
0.00
14516--15221
349
2.0
350
94
1
1229
33
10
5
50
1.60
17513--17611
49
2.0
49
96
0
180
22
23
30
24
1.99
17622--17675
27
2.0
27
100
0
108
18
25
18
37
1.94

Tables:   1

The End!