Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010017.1 Corchorus capsularis cultivar CVL-1 contig10038, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25121

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6369--6409
18
2.4
17
87
4
55
70
14
0
14
1.16
7301--8233
439
2.1
439
91
0
1490
42
15
13
29
1.84
11886--12023
67
2.0
70
84
4
183
26
27
3
42
1.72
12673--12709
16
2.2
17
90
4
58
21
8
0
70
1.13
12683--12757
19
3.8
20
72
10
57
21
12
2
64
1.39
12682--12747
8
8.5
8
80
6
55
22
12
1
63
1.36
16145--16197
27
2.0
27
85
7
74
39
9
1
49
1.46
17194--17236
2
22.0
2
92
4
70
46
2
0
51
1.13
19587--19635
14
3.9
14
70
29
56
36
0
0
63
0.95
19593--19639
22
2.1
22
100
0
94
36
0
0
63
0.94
19593--19631
11
3.5
11
86
13
62
35
0
0
64
0.94
24363--24397
12
2.8
13
86
4
54
14
42
8
34
1.76
24727--24764
20
1.9
20
88
0
58
21
44
7
26
1.79

Tables:   1

The End!