Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010022.1 Corchorus capsularis cultivar CVL-1 contig10043, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28551

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--45
2
22.0
2
100
0
88
0
50
0
50
1.00
5443--5626
84
2.3
80
86
5
255
46
19
9
24
1.80
6737--6770
15
2.3
15
94
0
59
2
17
0
79
0.86
20709--20759
26
2.0
26
96
0
93
52
7
9
29
1.62
20901--20973
38
1.9
37
91
5
119
34
8
20
36
1.83
22238--22270
8
4.0
8
92
7
57
15
24
0
60
1.35
22232--22272
17
2.4
17
95
4
73
19
21
0
58
1.39
23757--23794
20
1.9
20
88
0
58
5
15
10
68
1.36
24371--24679
168
1.8
167
94
0
546
31
19
8
40
1.81

Tables:   1

The End!