Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010027.1 Corchorus capsularis cultivar CVL-1 contig10048, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14610

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1534--1665
31
4.4
31
74
12
112
37
17
18
26
1.93
1594--1665
30
2.4
31
90
2
110
38
20
19
20
1.93
1556--1723
90
1.9
91
86
3
241
38
17
17
27
1.92
1770--1870
31
3.3
31
69
15
93
25
18
16
38
1.92
1770--1930
60
2.7
60
88
1
216
29
18
14
37
1.91
6403--6428
2
13.0
2
100
0
52
50
0
0
50
1.00
11060--11387
141
2.4
138
89
5
502
37
9
10
42
1.72
11673--12064
138
2.8
138
83
6
450
36
10
8
43
1.71

Tables:   1

The End!