Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010030.1 Corchorus capsularis cultivar CVL-1 contig10051, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54074

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105--129
2
12.5
2
100
0
50
52
0
0
48
1.00
582--612
6
5.2
6
100
0
62
67
0
0
32
0.91
13557--13611
28
2.0
28
88
0
83
32
18
18
30
1.95
14460--14490
3
10.3
3
100
0
62
32
0
0
67
0.91
14556--14587
13
2.4
14
85
15
50
37
0
0
62
0.95
14556--14591
7
5.4
7
90
9
58
38
0
0
61
0.96
14564--14589
13
2.0
13
100
0
52
38
0
0
61
0.96
39938--39999
31
2.0
31
82
17
76
30
17
3
48
1.63
41246--41277
16
1.9
17
93
6
57
34
0
25
40
1.56
44704--44745
14
2.9
15
92
3
68
26
14
14
45
1.83
50382--50422
20
2.0
20
95
0
73
56
9
7
26
1.58
51851--51989
34
4.2
34
93
2
239
23
28
22
26
1.99
52322--52365
20
2.2
20
87
0
61
29
43
9
18
1.80

Tables:   1

The End!