Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010031.1 Corchorus capsularis cultivar CVL-1 contig10052, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17762

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1168--1272
34
3.2
34
93
4
180
21
27
23
26
1.99
1603--1646
20
2.2
20
87
0
61
29
43
9
18
1.80
3032--3074
21
2.0
21
100
0
86
23
9
23
44
1.82
8065--8142
40
2.0
40
86
0
111
26
7
16
48
1.73
8257--8283
2
13.5
2
100
0
54
51
0
0
48
1.00
12510--12542
17
1.9
17
100
0
66
18
6
21
54
1.64
12511--12562
17
3.2
17
86
7
65
28
3
15
51
1.60
15397--15480
44
2.0
40
84
13
107
47
16
15
20
1.82

Tables:   1

The End!