Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010032.1 Corchorus capsularis cultivar CVL-1 contig10053, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25788

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--40
2
20.0
2
100
0
80
50
0
0
50
1.00
533--649
32
3.6
32
94
1
189
16
42
28
12
1.84
1790--1892
51
2.0
51
98
0
197
11
22
34
31
1.90
2447--2493
23
2.0
24
95
4
87
17
38
8
36
1.80
9230--9258
2
14.5
2
100
0
58
48
0
0
51
1.00
10765--10812
21
2.3
21
85
7
62
45
31
10
12
1.76
19331--19371
21
2.0
21
90
9
66
60
0
4
34
1.18
20037--20082
23
2.0
23
95
0
83
30
19
34
15
1.93
21325--21357
17
1.9
17
88
11
50
0
6
36
57
1.23
21797--21835
18
2.2
18
95
0
69
35
12
10
41
1.77
22620--23261
324
2.0
325
98
0
1250
33
15
19
31
1.93
24264--24333
31
2.2
32
87
10
99
21
18
7
52
1.69

Tables:   1

The End!