Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010038.1 Corchorus capsularis cultivar CVL-1 contig10059, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23539

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1581--1631
16
3.2
16
97
0
93
11
27
17
43
1.84
4906--5005
54
2.0
49
88
11
148
46
14
18
22
1.84
11414--11449
11
3.3
11
92
7
56
47
5
2
44
1.41
12252--12290
12
3.6
12
80
19
50
25
28
15
30
1.96
12378--12412
18
1.9
18
88
0
52
37
20
8
34
1.83
13255--13283
13
2.2
13
100
0
58
86
0
0
13
0.58
13439--13486
12
4.1
11
89
10
53
27
22
14
35
1.93
13444--13486
12
3.5
12
93
6
77
25
23
16
34
1.95
15237--15278
19
2.3
18
84
11
59
52
21
9
16
1.72

Tables:   1

The End!