Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010043.1 Corchorus capsularis cultivar CVL-1 contig10064, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32835

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
985--1032
13
3.7
13
78
8
53
62
14
4
18
1.47
9654--9723
28
2.5
27
81
6
77
44
21
17
17
1.87
10578--10604
2
13.5
2
100
0
54
51
0
0
48
1.00
11727--11756
6
5.0
6
100
0
60
0
50
16
33
1.46
12332--12366
11
3.2
11
83
0
52
77
17
5
0
0.96
25513--25554
21
2.0
21
95
0
75
40
7
4
47
1.52
27121--27182
30
2.1
30
82
11
74
32
11
12
43
1.79
27137--27182
15
3.1
15
90
3
76
30
10
13
45
1.77
31278--31342
31
2.1
31
100
0
130
41
23
15
20
1.89
32773--32830
2
29.0
2
100
0
116
50
0
0
50
1.00

Tables:   1

The End!