Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010044.1 Corchorus capsularis cultivar CVL-1 contig10065, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20514

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
992--1017
3
8.7
3
100
0
52
0
34
0
65
0.93
4588--4764
94
1.9
93
86
5
250
42
14
14
28
1.85
7573--7629
21
2.8
19
75
15
60
26
3
14
56
1.54
8392--8449
28
2.0
28
83
3
71
22
20
13
43
1.87
15183--15571
144
2.7
146
97
2
748
24
23
23
28
2.00

Tables:   1

The End!