Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010045.1 Corchorus capsularis cultivar CVL-1 contig10066, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27516

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7672--7906
108
2.1
108
83
6
287
36
12
17
33
1.88
11664--11698
18
1.9
18
88
0
52
17
11
28
42
1.83
14389--14458
29
2.3
30
80
9
81
34
10
22
32
1.88
20099--20123
13
1.9
13
100
0
50
44
0
0
56
0.99
26530--26622
46
2.0
46
100
0
186
49
21
11
17
1.78

Tables:   1

The End!