Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010051.1 Corchorus capsularis cultivar CVL-1 contig10072, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32453

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--27
2
13.5
2
100
0
54
48
0
0
51
1.00
10991--11021
7
4.4
7
100
0
62
48
38
12
0
1.42
12137--12199
29
2.2
29
88
5
92
20
20
15
42
1.89
12157--12213
29
2.0
29
86
6
80
19
24
15
40
1.90
12370--12410
20
2.0
20
90
0
64
41
9
19
29
1.83
25387--26652
329
3.8
328
78
7
1211
36
15
14
34
1.87
27003--27032
15
1.9
16
93
6
53
53
3
0
43
1.17
27563--27853
106
2.8
105
90
2
431
40
9
9
41
1.69
29705--30387
337
2.1
326
83
4
843
36
13
15
34
1.87
30728--30757
15
1.9
16
93
6
53
53
3
0
43
1.17
31574--31632
30
2.0
30
90
6
93
59
3
13
23
1.50

Tables:   1

The End!