Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010053.1 Corchorus capsularis cultivar CVL-1 contig10074, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39900

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
995--1090
41
2.4
41
77
10
108
32
9
18
39
1.83
1075--1112
13
2.9
13
92
0
58
36
5
39
18
1.73
19373--19401
13
2.2
13
100
0
58
24
10
24
41
1.86
19580--19640
31
2.0
31
83
6
79
32
26
11
29
1.91
23984--24030
19
2.5
19
83
10
53
59
2
23
14
1.46
31487--31711
70
3.1
70
84
5
261
47
1
14
36
1.53
31481--31719
78
3.2
78
86
5
316
48
1
13
35
1.53
32321--32448
67
1.9
67
86
0
184
21
19
25
34
1.96
36396--36452
16
3.6
16
88
4
71
36
40
15
7
1.75
37239--37270
16
2.0
16
100
0
64
50
37
12
0
1.41
37977--38016
2
20.0
2
90
10
64
47
2
0
50
1.14

Tables:   1

The End!