Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010054.1 Corchorus capsularis cultivar CVL-1 contig10075, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48982

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
296--332
18
2.1
18
100
0
74
27
0
16
56
1.40
587--613
2
13.5
2
100
0
54
51
0
0
48
1.00
3867--3904
11
3.5
11
85
10
51
57
2
0
39
1.12
6247--6281
2
17.5
2
100
0
70
48
0
0
51
1.00
7297--7334
11
3.5
11
85
10
51
57
2
0
39
1.12
7650--7679
14
2.1
14
93
0
51
26
10
6
56
1.57
24784--24822
20
1.9
21
89
5
62
71
12
12
2
1.24

Tables:   1

The End!