Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010059.1 Corchorus capsularis cultivar CVL-1 contig10080, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17319

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
384--649
75
3.5
75
93
3
437
41
6
17
34
1.74
1402--1504
45
2.3
46
83
6
131
11
21
23
43
1.85
1579--2103
188
2.8
188
98
0
1007
15
24
21
39
1.91
2494--2525
15
2.1
15
94
0
55
34
21
6
37
1.79
3688--3717
7
4.3
7
100
0
60
56
0
0
43
0.99
4780--4838
27
2.2
27
93
0
100
38
11
22
27
1.89
5381--5592
105
2.0
106
86
2
293
36
16
13
33
1.87
6472--6901
215
2.0
215
100
0
860
28
20
17
32
1.96
15184--15229
4
11.8
4
83
6
51
76
2
21
0
0.90
15471--15504
2
18.0
2
88
11
54
47
0
0
52
1.00
17293--17319
2
13.5
2
100
0
54
51
0
0
48
1.00

Tables:   1

The End!