Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010060.1 Corchorus capsularis cultivar CVL-1 contig10081, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18482

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57--85
2
14.5
2
100
0
58
51
0
0
48
1.00
1566--1611
18
2.5
19
80
19
53
32
8
15
43
1.77
2381--2447
6
11.7
6
83
15
79
17
2
67
11
1.35
2369--2448
12
6.4
13
80
13
73
17
2
67
12
1.33
2363--2448
18
4.9
19
72
25
59
17
2
67
12
1.33
7915--8002
46
1.9
46
95
0
158
37
7
23
30
1.84

Tables:   1

The End!