Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010064.1 Corchorus capsularis cultivar CVL-1 contig10085, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10268

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--337
54
6.3
54
85
3
385
32
26
18
23
1.97
304--372
35
2.0
35
94
0
120
31
17
17
33
1.93
268--462
89
2.2
89
96
0
354
34
20
15
29
1.93
390--691
35
8.7
34
91
2
426
31
18
17
32
1.94
390--684
69
4.2
70
88
3
436
31
18
17
32
1.94
390--694
104
2.9
102
87
4
427
31
18
17
32
1.94
1202--1235
16
2.1
16
88
5
50
52
8
14
23
1.69
1635--1674
15
2.7
15
88
3
55
0
5
10
85
0.75
8865--8912
21
2.3
21
81
0
60
8
37
16
37
1.79

Tables:   1

The End!