Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010065.1 Corchorus capsularis cultivar CVL-1 contig10086, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19621

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2425--2463
7
5.6
7
90
9
62
87
12
0
0
0.55
2433--2463
13
2.4
13
100
0
62
87
12
0
0
0.55
2910--2959
25
1.9
26
88
8
75
70
2
6
22
1.20
2922--3024
8
12.5
8
69
10
55
66
1
5
26
1.25
3073--3137
17
4.2
17
81
16
72
58
3
7
30
1.42
3085--3137
27
2.0
27
85
7
72
60
3
7
28
1.41
3183--3217
18
2.0
17
94
5
61
68
0
5
25
1.11
2922--3024
12
8.7
12
71
13
70
66
1
5
26
1.25
13407--13438
14
2.3
14
100
0
64
53
15
15
15
1.74
14309--14372
26
2.5
26
84
2
85
43
0
0
56
0.99
17888--17920
2
16.5
2
100
0
66
48
0
0
51
1.00
18568--18593
3
8.7
3
100
0
52
69
0
0
30
0.89

Tables:   1

The End!