Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010068.1 Corchorus capsularis cultivar CVL-1 contig10089, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12226

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3625--3661
17
2.2
17
100
0
74
21
0
35
43
1.53
8613--8646
16
2.1
17
88
5
52
35
2
14
47
1.60
9976--10094
59
2.0
59
93
0
202
36
21
22
20
1.95
10282--10317
2
18.0
2
100
0
72
50
0
0
50
1.00
10338--10373
18
2.0
18
94
0
63
66
5
19
8
1.38
10758--11000
43
5.7
42
84
7
269
25
15
34
23
1.94
10758--11005
85
2.9
83
82
8
293
26
15
35
23
1.94
11314--11473
79
2.0
79
89
4
243
30
16
23
29
1.96
11464--11641
59
3.0
59
94
0
320
35
21
22
20
1.96
11861--11896
18
2.0
18
94
0
63
66
5
19
8
1.38

Tables:   1

The End!