Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010070.1 Corchorus capsularis cultivar CVL-1 contig10091, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28506

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59--334
120
2.3
120
92
1
464
9
28
36
25
1.87
719--788
34
2.1
34
94
0
122
38
18
27
15
1.91
4192--4226
17
2.1
17
100
0
70
20
11
22
45
1.82
28347--28417
14
4.9
14
76
10
61
50
0
0
49
1.00
28347--28413
16
4.4
16
77
11
68
52
0
0
47
1.00
28303--28403
30
3.3
29
82
9
105
45
0
0
54
0.99

Tables:   1

The End!