Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010073.1 Corchorus capsularis cultivar CVL-1 contig10094, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29011

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4284--4320
2
18.5
2
88
0
56
45
0
0
54
1.00
5316--5351
13
2.8
13
91
0
54
86
0
13
0
0.58
19158--19379
108
2.0
109
91
3
356
30
18
17
32
1.95
19583--19652
29
2.3
30
80
7
79
22
14
17
45
1.84
21231--21330
49
2.0
49
100
0
200
30
6
34
30
1.81
21390--21447
29
2.2
25
82
17
73
46
24
8
20
1.78
24460--26738
332
6.7
329
73
10
1262
37
15
13
33
1.86
25340--25367
2
14.0
2
100
0
56
50
0
0
50
1.00
25430--25459
5
6.0
5
92
0
51
83
16
0
0
0.65
25504--28998
326
10.7
333
72
12
1300
36
16
13
33
1.88
26897--28998
326
6.5
323
76
10
1813
36
16
13
32
1.89

Tables:   1

The End!